GWASinspector: Comprehensive, efficient and easy to use quality control of genome-wide association study results

Tools for (automated and manual) quality control of the results of Genome Wide Association Studies


When evaluating the results of a genome-wide association study (GWAS), it is important to perform a quality control to ensure that the results are valid, complete, correctly formatted, and, in case of meta-analysis, consistent with other studies that have applied the same analysis. This package was developed to facilitate and streamline this process and provide the user with a comprehensive report.

Checkout the manual for detail information.


Our package is now avaialble from CRAN repository. You can simply run the below command in R to get the latest version.


Allele frequency standard references

Effect-size references


R 3.2 or higher


GWASinspector is licensed under the GNU General Public License, version 3.


Copyright © 2019 by Alireza Ani.

Disclaimer: We hope that GWASinspector will be of significant help in future researches, however, it is published WITHOUT ANY WARRANTY.